Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

improve wobble logic #17

Open
retaj opened this issue Mar 8, 2017 · 0 comments
Open

improve wobble logic #17

retaj opened this issue Mar 8, 2017 · 0 comments
Labels
enhancement

Comments

@retaj
Copy link
Collaborator

retaj commented Mar 8, 2017

If several circRNAs are within the predefined wobble range, they will be collapsed to a single circRNA by calling range() on their GrangesList.
I would prefer to collapse to the best-expressed circRNA candidate within the wobble range for a variatey of reasons (most discomforting one being that range() can return a set of coordinates that are never giving rise to a circRNA).
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@retaj